Common Lisp Bioinformatics Tools

This is a list of the bioinformatics tools developed at CHIP using Common Lisp.

SNPper - Retrieve and analyze Single Nucleotide Polymorphisms (SNPs) from the human genome.
unCHIP - Decode and annotate Affymetrix® microarray data files.
chipperDB - Store and analyze gene expression microarray data.
BEST - Identify the minimum set of SNPs tagging a haplotype block.
CAGED - Analysis of temporal profiles of gene expression data.

Contact Alberto Riva or Marco Ramoni for more information about these programs.


Alberto Riva
Last modified: Thu Jun 13 16:12:21 EDT 2002